# Autogenerated file, run tools/build/setup_cmake.py to regenerate imp_get_process_exit_code("setup_application integrative_docking" status ${PROJECT_BINARY_DIR} COMMAND ${PROJECT_SOURCE_DIR}/tools/build/setup_application.py --name=integrative_docking --datapath=${IMP_DATAPATH} --source=${PROJECT_SOURCE_DIR}) if(${status} EQUAL 0) message("Application IMP.integrative_docking ok") include_directories(${ANN_INCLUDE_PATH} ${BOOST.FILESYSTEM_INCLUDE_PATH} ${BOOST.PROGRAMOPTIONS_INCLUDE_PATH} ${BOOST.RANDOM_INCLUDE_PATH} ${BOOST.REGEX_INCLUDE_PATH} ${BOOST.SYSTEM_INCLUDE_PATH} ${CGAL_INCLUDE_PATH} ${GPERFTOOLS_INCLUDE_PATH} ${LOG4CXX_INCLUDE_PATH} ${TCMALLOC_HEAPCHECKER_INCLUDE_PATH} ${TCMALLOC_HEAPPROFILER_INCLUDE_PATH} ${PROJECT_SOURCE_DIR}/applications/integrative_docking/cross_linking/lib ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em2d_dock/lib ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em3d_dock/lib ${PROJECT_SOURCE_DIR}/applications/integrative_docking/foxsdock/lib ${PROJECT_SOURCE_DIR}/applications/integrative_docking/nmr_rtc/lib) link_directories(${ANN_LINK_PATH} ${BOOST.FILESYSTEM_LINK_PATH} ${BOOST.PROGRAMOPTIONS_LINK_PATH} ${BOOST.RANDOM_LINK_PATH} ${BOOST.REGEX_LINK_PATH} ${BOOST.SYSTEM_LINK_PATH} ${CGAL_LINK_PATH} ${GPERFTOOLS_LINK_PATH} ${LOG4CXX_LINK_PATH} ${TCMALLOC_HEAPCHECKER_LINK_PATH} ${TCMALLOC_HEAPPROFILER_LINK_PATH}) if(${IMP_SPLIT_PYTHON_TESTS}) imp_execute_process("get_python_tests integrative_docking" ${PROJECT_BINARY_DIR} COMMAND ${PROJECT_SOURCE_DIR}/tools/build/get_python_tests.py --application=integrative_docking ${PROJECT_SOURCE_DIR}) endif() add_executable("combine_scores" ${PROJECT_SOURCE_DIR}/applications/integrative_docking/combine_scores/combine_scores.cpp) target_link_libraries(combine_scores ${IMP_EM_LIBRARY} ${IMP_SAXS_LIBRARY} ${IMP_BASE_LIBRARY} ${IMP_CGAL_LIBRARY} ${IMP_ALGEBRA_LIBRARY} ${IMP_KERNEL_LIBRARY} ${IMP_DISPLAY_LIBRARY} ${IMP_SCORE_FUNCTOR_LIBRARY} ${IMP_STATISTICS_LIBRARY} ${IMP_CORE_LIBRARY} ${IMP_CONTAINER_LIBRARY} ${IMP_ATOM_LIBRARY} ${BOOST.FILESYSTEM_LIBRARIES} ${BOOST.PROGRAMOPTIONS_LIBRARIES} ${BOOST.SYSTEM_LIBRARIES} ${GPERFTOOLS_LIBRARIES} ${TCMALLOC_HEAPPROFILER_LIBRARIES} ${TCMALLOC_HEAPCHECKER_LIBRARIES} ${LOG4CXX_LIBRARIES} ${BOOST.RANDOM_LIBRARIES} ${CGAL_LIBRARIES} ${ANN_LIBRARIES} ${BOOST.REGEX_LIBRARIES}) set_target_properties(combine_scores PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") install(TARGETS combine_scores DESTINATION ${CMAKE_INSTALL_BINDIR}) set(bins ${bins} combine_scores) add_executable("recompute_zscore" ${PROJECT_SOURCE_DIR}/applications/integrative_docking/combine_scores/recompute_zscore.cpp) target_link_libraries(recompute_zscore ${IMP_EM_LIBRARY} ${IMP_SAXS_LIBRARY} ${IMP_BASE_LIBRARY} ${IMP_CGAL_LIBRARY} ${IMP_ALGEBRA_LIBRARY} ${IMP_KERNEL_LIBRARY} ${IMP_DISPLAY_LIBRARY} ${IMP_SCORE_FUNCTOR_LIBRARY} ${IMP_STATISTICS_LIBRARY} ${IMP_CORE_LIBRARY} ${IMP_CONTAINER_LIBRARY} ${IMP_ATOM_LIBRARY} ${BOOST.FILESYSTEM_LIBRARIES} ${BOOST.PROGRAMOPTIONS_LIBRARIES} ${BOOST.SYSTEM_LIBRARIES} ${GPERFTOOLS_LIBRARIES} ${TCMALLOC_HEAPPROFILER_LIBRARIES} ${TCMALLOC_HEAPCHECKER_LIBRARIES} ${LOG4CXX_LIBRARIES} ${BOOST.RANDOM_LIBRARIES} ${CGAL_LIBRARIES} ${ANN_LIBRARIES} ${BOOST.REGEX_LIBRARIES}) set_target_properties(recompute_zscore PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") install(TARGETS recompute_zscore DESTINATION ${CMAKE_INSTALL_BINDIR}) set(bins ${bins} recompute_zscore) add_executable("cross_links_score" ${PROJECT_SOURCE_DIR}/applications/integrative_docking/cross_linking/cross_links_score.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/cross_linking/lib/CrossLink.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/cross_linking/lib/helpers.cpp) target_link_libraries(cross_links_score ${IMP_EM_LIBRARY} ${IMP_SAXS_LIBRARY} ${IMP_BASE_LIBRARY} ${IMP_CGAL_LIBRARY} ${IMP_ALGEBRA_LIBRARY} ${IMP_KERNEL_LIBRARY} ${IMP_DISPLAY_LIBRARY} ${IMP_SCORE_FUNCTOR_LIBRARY} ${IMP_STATISTICS_LIBRARY} ${IMP_CORE_LIBRARY} ${IMP_CONTAINER_LIBRARY} ${IMP_ATOM_LIBRARY} ${BOOST.FILESYSTEM_LIBRARIES} ${BOOST.PROGRAMOPTIONS_LIBRARIES} ${BOOST.SYSTEM_LIBRARIES} ${GPERFTOOLS_LIBRARIES} ${TCMALLOC_HEAPPROFILER_LIBRARIES} ${TCMALLOC_HEAPCHECKER_LIBRARIES} ${LOG4CXX_LIBRARIES} ${BOOST.RANDOM_LIBRARIES} ${CGAL_LIBRARIES} ${ANN_LIBRARIES} ${BOOST.REGEX_LIBRARIES}) set_target_properties(cross_links_score PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") install(TARGETS cross_links_score DESTINATION ${CMAKE_INSTALL_BINDIR}) set(bins ${bins} cross_links_score) add_executable("interface_cross_links" ${PROJECT_SOURCE_DIR}/applications/integrative_docking/cross_linking/interface_cross_links.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/cross_linking/lib/CrossLink.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/cross_linking/lib/helpers.cpp) target_link_libraries(interface_cross_links ${IMP_EM_LIBRARY} ${IMP_SAXS_LIBRARY} ${IMP_BASE_LIBRARY} ${IMP_CGAL_LIBRARY} ${IMP_ALGEBRA_LIBRARY} ${IMP_KERNEL_LIBRARY} ${IMP_DISPLAY_LIBRARY} ${IMP_SCORE_FUNCTOR_LIBRARY} ${IMP_STATISTICS_LIBRARY} ${IMP_CORE_LIBRARY} ${IMP_CONTAINER_LIBRARY} ${IMP_ATOM_LIBRARY} ${BOOST.FILESYSTEM_LIBRARIES} ${BOOST.PROGRAMOPTIONS_LIBRARIES} ${BOOST.SYSTEM_LIBRARIES} ${GPERFTOOLS_LIBRARIES} ${TCMALLOC_HEAPPROFILER_LIBRARIES} ${TCMALLOC_HEAPCHECKER_LIBRARIES} ${LOG4CXX_LIBRARIES} ${BOOST.RANDOM_LIBRARIES} ${CGAL_LIBRARIES} ${ANN_LIBRARIES} ${BOOST.REGEX_LIBRARIES}) set_target_properties(interface_cross_links PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") install(TARGETS interface_cross_links DESTINATION ${CMAKE_INSTALL_BINDIR}) set(bins ${bins} interface_cross_links) add_executable("em2d_score" ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em2d_dock/em2d_score.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em2d_dock/lib/Projection.cpp) target_link_libraries(em2d_score ${IMP_EM_LIBRARY} ${IMP_SAXS_LIBRARY} ${IMP_BASE_LIBRARY} ${IMP_CGAL_LIBRARY} ${IMP_ALGEBRA_LIBRARY} ${IMP_KERNEL_LIBRARY} ${IMP_DISPLAY_LIBRARY} ${IMP_SCORE_FUNCTOR_LIBRARY} ${IMP_STATISTICS_LIBRARY} ${IMP_CORE_LIBRARY} ${IMP_CONTAINER_LIBRARY} ${IMP_ATOM_LIBRARY} ${BOOST.FILESYSTEM_LIBRARIES} ${BOOST.PROGRAMOPTIONS_LIBRARIES} ${BOOST.SYSTEM_LIBRARIES} ${GPERFTOOLS_LIBRARIES} ${TCMALLOC_HEAPPROFILER_LIBRARIES} ${TCMALLOC_HEAPCHECKER_LIBRARIES} ${LOG4CXX_LIBRARIES} ${BOOST.RANDOM_LIBRARIES} ${CGAL_LIBRARIES} ${ANN_LIBRARIES} ${BOOST.REGEX_LIBRARIES}) set_target_properties(em2d_score PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") install(TARGETS em2d_score DESTINATION ${CMAKE_INSTALL_BINDIR}) set(bins ${bins} em2d_score) add_executable("em2d_single_score" ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em2d_dock/em2d_single_score.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em2d_dock/lib/Projection.cpp) target_link_libraries(em2d_single_score ${IMP_EM_LIBRARY} ${IMP_SAXS_LIBRARY} ${IMP_BASE_LIBRARY} ${IMP_CGAL_LIBRARY} ${IMP_ALGEBRA_LIBRARY} ${IMP_KERNEL_LIBRARY} ${IMP_DISPLAY_LIBRARY} ${IMP_SCORE_FUNCTOR_LIBRARY} ${IMP_STATISTICS_LIBRARY} ${IMP_CORE_LIBRARY} ${IMP_CONTAINER_LIBRARY} ${IMP_ATOM_LIBRARY} ${BOOST.FILESYSTEM_LIBRARIES} ${BOOST.PROGRAMOPTIONS_LIBRARIES} ${BOOST.SYSTEM_LIBRARIES} ${GPERFTOOLS_LIBRARIES} ${TCMALLOC_HEAPPROFILER_LIBRARIES} ${TCMALLOC_HEAPCHECKER_LIBRARIES} ${LOG4CXX_LIBRARIES} ${BOOST.RANDOM_LIBRARIES} ${CGAL_LIBRARIES} ${ANN_LIBRARIES} ${BOOST.REGEX_LIBRARIES}) set_target_properties(em2d_single_score PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") install(TARGETS em2d_single_score DESTINATION ${CMAKE_INSTALL_BINDIR}) set(bins ${bins} em2d_single_score) add_executable("em3d_score" ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em3d_dock/em3d_score.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em3d_dock/lib/EMFit.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em3d_dock/lib/MapScorer.cpp) target_link_libraries(em3d_score ${IMP_EM_LIBRARY} ${IMP_SAXS_LIBRARY} ${IMP_BASE_LIBRARY} ${IMP_CGAL_LIBRARY} ${IMP_ALGEBRA_LIBRARY} ${IMP_KERNEL_LIBRARY} ${IMP_DISPLAY_LIBRARY} ${IMP_SCORE_FUNCTOR_LIBRARY} ${IMP_STATISTICS_LIBRARY} ${IMP_CORE_LIBRARY} ${IMP_CONTAINER_LIBRARY} ${IMP_ATOM_LIBRARY} ${BOOST.FILESYSTEM_LIBRARIES} ${BOOST.PROGRAMOPTIONS_LIBRARIES} ${BOOST.SYSTEM_LIBRARIES} ${GPERFTOOLS_LIBRARIES} ${TCMALLOC_HEAPPROFILER_LIBRARIES} ${TCMALLOC_HEAPCHECKER_LIBRARIES} ${LOG4CXX_LIBRARIES} ${BOOST.RANDOM_LIBRARIES} ${CGAL_LIBRARIES} ${ANN_LIBRARIES} ${BOOST.REGEX_LIBRARIES}) set_target_properties(em3d_score PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") install(TARGETS em3d_score DESTINATION ${CMAKE_INSTALL_BINDIR}) set(bins ${bins} em3d_score) add_executable("em3d_single_score" ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em3d_dock/em3d_single_score.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em3d_dock/lib/EMFit.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/em3d_dock/lib/MapScorer.cpp) target_link_libraries(em3d_single_score ${IMP_EM_LIBRARY} ${IMP_SAXS_LIBRARY} ${IMP_BASE_LIBRARY} ${IMP_CGAL_LIBRARY} ${IMP_ALGEBRA_LIBRARY} ${IMP_KERNEL_LIBRARY} ${IMP_DISPLAY_LIBRARY} ${IMP_SCORE_FUNCTOR_LIBRARY} ${IMP_STATISTICS_LIBRARY} ${IMP_CORE_LIBRARY} ${IMP_CONTAINER_LIBRARY} ${IMP_ATOM_LIBRARY} ${BOOST.FILESYSTEM_LIBRARIES} ${BOOST.PROGRAMOPTIONS_LIBRARIES} ${BOOST.SYSTEM_LIBRARIES} ${GPERFTOOLS_LIBRARIES} ${TCMALLOC_HEAPPROFILER_LIBRARIES} ${TCMALLOC_HEAPCHECKER_LIBRARIES} ${LOG4CXX_LIBRARIES} ${BOOST.RANDOM_LIBRARIES} ${CGAL_LIBRARIES} ${ANN_LIBRARIES} ${BOOST.REGEX_LIBRARIES}) set_target_properties(em3d_single_score PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") install(TARGETS em3d_single_score DESTINATION ${CMAKE_INSTALL_BINDIR}) set(bins ${bins} em3d_single_score) add_executable("saxs_score" ${PROJECT_SOURCE_DIR}/applications/integrative_docking/foxsdock/saxs_score.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/foxsdock/lib/helpers.cpp) target_link_libraries(saxs_score ${IMP_EM_LIBRARY} ${IMP_SAXS_LIBRARY} ${IMP_BASE_LIBRARY} ${IMP_CGAL_LIBRARY} ${IMP_ALGEBRA_LIBRARY} ${IMP_KERNEL_LIBRARY} ${IMP_DISPLAY_LIBRARY} ${IMP_SCORE_FUNCTOR_LIBRARY} ${IMP_STATISTICS_LIBRARY} ${IMP_CORE_LIBRARY} ${IMP_CONTAINER_LIBRARY} ${IMP_ATOM_LIBRARY} ${BOOST.FILESYSTEM_LIBRARIES} ${BOOST.PROGRAMOPTIONS_LIBRARIES} ${BOOST.SYSTEM_LIBRARIES} ${GPERFTOOLS_LIBRARIES} ${TCMALLOC_HEAPPROFILER_LIBRARIES} ${TCMALLOC_HEAPCHECKER_LIBRARIES} ${LOG4CXX_LIBRARIES} ${BOOST.RANDOM_LIBRARIES} ${CGAL_LIBRARIES} ${ANN_LIBRARIES} ${BOOST.REGEX_LIBRARIES}) set_target_properties(saxs_score PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") install(TARGETS saxs_score DESTINATION ${CMAKE_INSTALL_BINDIR}) set(bins ${bins} saxs_score) add_executable("interface_rtc" ${PROJECT_SOURCE_DIR}/applications/integrative_docking/nmr_rtc/interface_rtc.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/nmr_rtc/lib/ResidueContent.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/nmr_rtc/lib/helpers.cpp) target_link_libraries(interface_rtc ${IMP_EM_LIBRARY} ${IMP_SAXS_LIBRARY} ${IMP_BASE_LIBRARY} ${IMP_CGAL_LIBRARY} ${IMP_ALGEBRA_LIBRARY} ${IMP_KERNEL_LIBRARY} ${IMP_DISPLAY_LIBRARY} ${IMP_SCORE_FUNCTOR_LIBRARY} ${IMP_STATISTICS_LIBRARY} ${IMP_CORE_LIBRARY} ${IMP_CONTAINER_LIBRARY} ${IMP_ATOM_LIBRARY} ${BOOST.FILESYSTEM_LIBRARIES} ${BOOST.PROGRAMOPTIONS_LIBRARIES} ${BOOST.SYSTEM_LIBRARIES} ${GPERFTOOLS_LIBRARIES} ${TCMALLOC_HEAPPROFILER_LIBRARIES} ${TCMALLOC_HEAPCHECKER_LIBRARIES} ${LOG4CXX_LIBRARIES} ${BOOST.RANDOM_LIBRARIES} ${CGAL_LIBRARIES} ${ANN_LIBRARIES} ${BOOST.REGEX_LIBRARIES}) set_target_properties(interface_rtc PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") install(TARGETS interface_rtc DESTINATION ${CMAKE_INSTALL_BINDIR}) set(bins ${bins} interface_rtc) add_executable("nmr_rtc_score" ${PROJECT_SOURCE_DIR}/applications/integrative_docking/nmr_rtc/nmr_rtc_score.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/nmr_rtc/lib/ResidueContent.cpp ${PROJECT_SOURCE_DIR}/applications/integrative_docking/nmr_rtc/lib/helpers.cpp) target_link_libraries(nmr_rtc_score ${IMP_EM_LIBRARY} ${IMP_SAXS_LIBRARY} ${IMP_BASE_LIBRARY} ${IMP_CGAL_LIBRARY} ${IMP_ALGEBRA_LIBRARY} ${IMP_KERNEL_LIBRARY} ${IMP_DISPLAY_LIBRARY} ${IMP_SCORE_FUNCTOR_LIBRARY} ${IMP_STATISTICS_LIBRARY} ${IMP_CORE_LIBRARY} ${IMP_CONTAINER_LIBRARY} ${IMP_ATOM_LIBRARY} ${BOOST.FILESYSTEM_LIBRARIES} ${BOOST.PROGRAMOPTIONS_LIBRARIES} ${BOOST.SYSTEM_LIBRARIES} ${GPERFTOOLS_LIBRARIES} ${TCMALLOC_HEAPPROFILER_LIBRARIES} ${TCMALLOC_HEAPCHECKER_LIBRARIES} ${LOG4CXX_LIBRARIES} ${BOOST.RANDOM_LIBRARIES} ${CGAL_LIBRARIES} ${ANN_LIBRARIES} ${BOOST.REGEX_LIBRARIES}) set_target_properties(nmr_rtc_score PROPERTIES RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") install(TARGETS nmr_rtc_score DESTINATION ${CMAKE_INSTALL_BINDIR}) set(bins ${bins} nmr_rtc_score) add_custom_target("IMP.integrative_docking" ALL DEPENDS ${bins}) set(pybins ${PROJECT_SOURCE_DIR}/applications/integrative_docking/dependencies.py ${PROJECT_SOURCE_DIR}/applications/integrative_docking/idock.py) foreach (pybin ${pybins}) install(PROGRAMS ${pybin} DESTINATION ${CMAKE_INSTALL_BINDIR}) endforeach(pybin) set(pytests ${PROJECT_SOURCE_DIR}/applications/integrative_docking/test/test_combine_scores.py ${PROJECT_SOURCE_DIR}/applications/integrative_docking/test/test_cross_links.py ${PROJECT_SOURCE_DIR}/applications/integrative_docking/test/test_em2d_dock.py ${PROJECT_SOURCE_DIR}/applications/integrative_docking/test/test_em3d_dock.py ${PROJECT_SOURCE_DIR}/applications/integrative_docking/test/test_foxsdock.py ${PROJECT_SOURCE_DIR}/applications/integrative_docking/test/test_idock.py ${PROJECT_SOURCE_DIR}/applications/integrative_docking/test/test_nmr_rtc.py) foreach (test ${pytests}) GET_FILENAME_COMPONENT(name ${test} NAME_WE) if(EXISTS "${PROJECT_BINARY_DIR}/test/integrative_docking/${name}.pytests") FILE(READ "${PROJECT_BINARY_DIR}/test/integrative_docking/${name}.pytests" contents) STRING(REGEX REPLACE ";" "\\\\;" contents "${contents}") STRING(REGEX REPLACE "\n" ";" contents "${contents}") foreach(testline ${contents}) string(REGEX REPLACE "([A-Za-z0-9_]+\\.[A-Za-z0-9_]+) (.*)" "\\1;\\2" split "${testline}") list(GET split 0 methname) list(GET split 1 docstring) add_test("integrative_docking.${name}.${methname}" ${IMP_TEST_SETUP} python ${test} "${methname}") set_tests_properties("integrative_docking.${name}.${methname}" PROPERTIES LABELS "IMP.integrative_docking;test") set_tests_properties("integrative_docking.${name}.${methname}" PROPERTIES MEASUREMENT "docstring=${docstring}") endforeach() else() add_test("integrative_docking.${name}" ${IMP_TEST_SETUP} python ${test}) set_tests_properties("integrative_docking.${name}" PROPERTIES LABELS "IMP.integrative_docking;test") endif() endforeach(test) elseif(${status} EQUAL 1) message("Application integrative_docking disabled") else() message(FATAL_ERROR "setup_application failed ${status}") endif()