import IMP import IMP.test import IMP.container import math # Use faster built-in 'set' type on newer Pythons; fall back to the older # 'sets' module on older Pythons try: x = set del x except NameError: import sets set = sets.Set class Tests(IMP.test.TestCase): """Tests for all pairs pair container""" def test_allp(self): """Check AllPairContainer""" m= IMP.Model() for i in range(0,50): p= IMP.Particle(m) lp= IMP.container.ListSingletonContainer(m.get_particles()) apc= IMP.container.AllPairContainer(lp) #self.assertEqual(lp.get_ref_count(), 2) # use that names are unique psl= set() print apc.get_number_of_particle_pairs() print lp.get_number_of_particles() IMP.base.set_log_level(IMP.base.VERBOSE) for i in range(0, apc.get_number_of_particle_pairs()): #print ap[-1][0] #print ap[-1][1] n0= apc.get_particle_pair(i)[0].get_name() n1= apc.get_particle_pair(i)[1].get_name() if n0 < n1: dp= (n0, n1) else: dp= (n1, n0) print dp #print psl self.assertNotIn(dp, psl, "Pair " + n0 + " and " +n1\ +" is already in list "+ str(psl)) psl=psl.union([dp]) print psl self.assertEqual(apc.get_number_of_particle_pairs(), lp.get_number_of_particles()*(lp.get_number_of_particles()-1)/2) if __name__ == '__main__': IMP.test.main()