# Autogenerated file, run tools/build/setup_cmake.py to regenerate

include_directories(${ANN_INCLUDE_PATH}
        ${BOOST.FILESYSTEM_INCLUDE_PATH}
        ${BOOST.GRAPH_INCLUDE_PATH}
        ${BOOST.PROGRAMOPTIONS_INCLUDE_PATH}
        ${BOOST.RANDOM_INCLUDE_PATH}
        ${BOOST.REGEX_INCLUDE_PATH}
        ${BOOST.SYSTEM_INCLUDE_PATH}
        ${CGAL_INCLUDE_PATH}
        ${FFTW3_INCLUDE_PATH}
        ${GPERFTOOLS_INCLUDE_PATH}
        ${GSL_INCLUDE_PATH}
        ${HDF5_INCLUDE_PATH}
        ${LOG4CXX_INCLUDE_PATH}
        ${OPENCV21_INCLUDE_PATH}
        ${OPENCV22_INCLUDE_PATH}
        ${RMF_INCLUDE_PATH}
        ${TCMALLOC_HEAPCHECKER_INCLUDE_PATH}
        ${TCMALLOC_HEAPPROFILER_INCLUDE_PATH})
link_directories(${ANN_LINK_PATH}
        ${BOOST.FILESYSTEM_LINK_PATH}
        ${BOOST.GRAPH_LINK_PATH}
        ${BOOST.PROGRAMOPTIONS_LINK_PATH}
        ${BOOST.RANDOM_LINK_PATH}
        ${BOOST.REGEX_LINK_PATH}
        ${BOOST.SYSTEM_LINK_PATH}
        ${CGAL_LINK_PATH}
        ${FFTW3_LINK_PATH}
        ${GPERFTOOLS_LINK_PATH}
        ${GSL_LINK_PATH}
        ${HDF5_LINK_PATH}
        ${LOG4CXX_LINK_PATH}
        ${OPENCV21_LINK_PATH}
        ${OPENCV22_LINK_PATH}
        ${RMF_LINK_PATH}
        ${TCMALLOC_HEAPCHECKER_LINK_PATH}
        ${TCMALLOC_HEAPPROFILER_LINK_PATH})

set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${EM2D_CXX_FLAGS}")


set(cppbins ${PROJECT_SOURCE_DIR}/modules/em2d/bin/process_pdb.cpp
${PROJECT_SOURCE_DIR}/modules/em2d/bin/score_model.cpp)

foreach (bin ${cppbins})
   GET_FILENAME_COMPONENT(name ${bin} NAME_WE)
   add_executable(em2d.${name} ${bin})
   target_link_libraries(em2d.${name}     imp_em2d
    ${IMP_BASE_LIBRARY}
${IMP_CGAL_LIBRARY}
${IMP_ALGEBRA_LIBRARY}
${IMP_KERNEL_LIBRARY}
${IMP_DISPLAY_LIBRARY}
${IMP_GSL_LIBRARY}
${IMP_SCORE_FUNCTOR_LIBRARY}
${IMP_STATISTICS_LIBRARY}
${IMP_CORE_LIBRARY}
${IMP_CONTAINER_LIBRARY}
${IMP_ATOM_LIBRARY}
${IMP_EM_LIBRARY}
${IMP_RMF_LIBRARY}
${IMP_DOMINO_LIBRARY}
    ${FFTW3_LIBRARIES}
${BOOST.PROGRAMOPTIONS_LIBRARIES}
${BOOST.FILESYSTEM_LIBRARIES}
${OPENCV21_LIBRARIES}
${OPENCV22_LIBRARIES}
${BOOST.SYSTEM_LIBRARIES}
${GPERFTOOLS_LIBRARIES}
${TCMALLOC_HEAPPROFILER_LIBRARIES}
${TCMALLOC_HEAPCHECKER_LIBRARIES}
${LOG4CXX_LIBRARIES}
${BOOST.RANDOM_LIBRARIES}
${CGAL_LIBRARIES}
${ANN_LIBRARIES}
${GSL_LIBRARIES}
${BOOST.REGEX_LIBRARIES}
${RMF_LIBRARIES}
${BOOST.GRAPH_LIBRARIES}
${HDF5_LIBRARIES})
   set_target_properties(em2d.${name} PROPERTIES
                         RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/module_bin/em2d"
                         OUTPUT_NAME ${name})
   set(executables ${executables} em2d.${name})
endforeach(bin)


add_custom_target("imp_em2d_bins" ALL DEPENDS ${executables})