INFO:domino_model:Creating initial assembly from xlinks and docking
INFO:DominoModel:Setting cross-linking restraint between 3sfdB 23 - 3sfdA 456
INFO:DominoModel:Adding restraint d_3sfdB23_3sfdA456 weight 100 max_score False
INFO:DominoModel:Setting cross-linking restraint between 3sfdB 241 - 3sfdC 112
INFO:DominoModel:Adding restraint d_3sfdB241_3sfdC112 weight 100 max_score False
INFO:DominoModel:Setting cross-linking restraint between 3sfdB 205 - 3sfdD 37
INFO:DominoModel:Adding restraint d_3sfdB205_3sfdD37 weight 100 max_score False
INFO:DominoModel:Setting cross-linking restraint between 3sfdB 177 - 3sfdD 99
INFO:DominoModel:Adding restraint d_3sfdB177_3sfdD99 weight 100 max_score False
INFO:DominoModel:Setting cross-linking restraint between 3sfdC 95 - 3sfdD 132
INFO:DominoModel:Adding restraint d_3sfdC95_3sfdD132 weight 100 max_score False
INFO:DominoModel:Setting cross-linking restraint between 3sfdC 9 - 3sfdD 37
INFO:DominoModel:Adding restraint d_3sfdC9_3sfdD37 weight 100 max_score False
INFO:DominoModel:Setting cross-linking restraint between 3sfdC 78 - 3sfdD 128
INFO:DominoModel:Adding restraint d_3sfdC78_3sfdD128 weight 100 max_score False
INFO:buildxlinks:The suggested order for the docking pairs is [('3sfdB', '3sfdA'), ('3sfdB', '3sfdC'), ('3sfdB', '3sfdD'), ('3sfdD', '3sfdC')]
INFO:docking_related:===> Docking 3sfdB-3sfdA_initial_docking.pdb into 3sfdB.pdb with HEX
INFO:docking_related:Filtering results of docking in hex_solutions_3sfdB-3sfdA.txt with xlinks [(23, 456, 30)]
INFO:docking_related:===> Docking 3sfdB-3sfdC_initial_docking.pdb into 3sfdB.pdb with HEX
INFO:docking_related:Filtering results of docking in hex_solutions_3sfdB-3sfdC.txt with xlinks [(241, 112, 30)]
INFO:docking_related:===> Docking 3sfdB-3sfdD_initial_docking.pdb into 3sfdB.pdb with HEX
INFO:docking_related:Filtering results of docking in hex_solutions_3sfdB-3sfdD.txt with xlinks [(205, 37, 30), (177, 99, 30)]
INFO:docking_related:===> Docking 3sfdD-3sfdC_initial_docking.pdb into 3sfdD.pdb with HEX
INFO:docking_related:Filtering results of docking in hex_solutions_3sfdD-3sfdC.txt with xlinks [(132, 95, 30), (37, 9, 30), (128, 78, 30)]